* update hdf5 to 1.14.4.3-1

hdf5/.SRCINFO

@@ -0,0 +1,22 @@
+pkgbase = hdf5
+	pkgdesc = General purpose library and file format for storing scientific data
+	pkgver = 1.14.4.3
+	pkgrel = 1
+	url = https://www.hdfgroup.org/hdf5
+	arch = x86_64
+	license = custom
+	makedepends = cmake
+	makedepends = time
+	makedepends = gcc-fortran
+	makedepends = java-environment
+	depends = zlib
+	depends = libaec
+	depends = bash
+	provides = hdf5-java
+	replaces = hdf5-java
+	source = https://github.com/HDFGroup/hdf5/archive/hdf5_1.14.4.3/hdf5-1.14.4.3.tar.gz
+	source = https://github.com/HDFGroup/hdf5/commit/ea760136.patch
+	sha256sums = 690c1db7ba0fed4ffac61709236675ffd99d95d191e8920ee79c58d7e7ea3361
+	sha256sums = eac6786aa11e84090ce9b35d0eb3a8054d28d0d22debfe31c65845379325218d
+
+pkgname = hdf5

hdf5/PKGBUILD

@@ -6,8 +6,8 @@
 # Contributor: Tom K <tomk@runbox.com>
 
 pkgname=hdf5
-pkgver=1.14.4.2
-pkgrel=6
+pkgver=1.14.4.3
+pkgrel=1
 pkgdesc="General purpose library and file format for storing scientific data"
 arch=(x86_64 powerpc64le powerpc64 powerpc riscv64)
 url="https://www.hdfgroup.org/hdf5"
@@ -18,18 +18,14 @@ replaces=(hdf5-java)
 provides=(hdf5-java)
 #source=(https://support.hdfgroup.org/ftp/HDF5/releases/${pkgname}-${pkgver:0:4}/${pkgname}-${pkgver/_/-}/src/${pkgname}-${pkgver/_/-}.tar.bz2)
 source=(https://github.com/HDFGroup/hdf5/archive/hdf5_$pkgver/$pkgname-$pkgver.tar.gz
-        hdf5-fix-crash-partially-initialized-datatypes.patch
         https://github.com/HDFGroup/hdf5/commit/ea760136.patch)
-sha256sums=('44c47120e8beeb69f83b2de10203dceb6ef63f253b7859063a60205c8f48ab80'
-            'e3b096ac3e401b7af900eb5eacbcd9b7b5d83619bc7e2fad9cf6fa8420acf7c9'
+sha256sums=('690c1db7ba0fed4ffac61709236675ffd99d95d191e8920ee79c58d7e7ea3361'
             'eac6786aa11e84090ce9b35d0eb3a8054d28d0d22debfe31c65845379325218d')
 
 prepare() {
     cd ${pkgname}-${pkgname}_${pkgver/_/-}
     # Don't mess with build flags
     sed -e '/-Werror/d' -i configure
-    # Fix segfault in h5py tests
-    patch -p1 -i ../hdf5-fix-crash-partially-initialized-datatypes.patch
     # Fix operator=
     patch -p1 -i ../ea760136.patch
 }

hdf5/hdf5-1.12.0-compat-1.6.patch

@@ -1,89 +0,0 @@
---- a/H5version.h
-+++ b/H5version.h
-@@ -97,6 +97,10 @@
-   #define H5Ewalk_vers 1
- #endif /* !defined(H5Ewalk_vers) */
- 
-+#if !defined(H5Fget_info_vers)
-+  #define H5Fget_info_vers 1
-+#endif /* !defined(H5Fget_info_vers) */
-+
- #if !defined(H5Gcreate_vers)
-   #define H5Gcreate_vers 1
- #endif /* !defined(H5Gcreate_vers) */
-@@ -105,6 +109,38 @@
-   #define H5Gopen_vers 1
- #endif /* !defined(H5Gopen_vers) */
- 
-+#if !defined(H5Lget_info_vers)
-+  #define H5Lget_info_vers 1
-+#endif /* !defined(H5Lget_info_vers) */
-+
-+#if !defined(H5Lget_info_by_idx_vers)
-+  #define H5Lget_info_by_idx_vers 1
-+#endif /* !defined(H5Lget_info_by_idx_vers) */
-+
-+#if !defined(H5Oget_info_vers)
-+  #define H5Oget_info_vers 1
-+#endif /* !defined(H5Oget_info_vers) */
-+
-+#if !defined(H5Oget_info_by_idx_vers)
-+  #define H5Oget_info_by_idx_vers 1
-+#endif /* !defined(H5Oget_info_by_idx_vers) */
-+
-+#if !defined(H5Oget_info_by_name_vers)
-+  #define H5Oget_info_by_name_vers 1
-+#endif /* !defined(H5Oget_info_by_name_vers) */
-+
-+#if !defined(H5Ovisit_vers)
-+  #define H5Ovisit_vers 1
-+#endif /* !defined(H5Ovisit_vers) */
-+
-+#if !defined(H5Ovisit_by_name_vers)
-+  #define H5Ovisit_by_name_vers 1
-+#endif /* !defined(H5Ovisit_by_name_vers) */
-+
-+#if !defined(H5Pencode_vers)
-+  #define H5Pencode_vers 1
-+#endif /* !defined(H5Pencode_vers) */
-+
- #if !defined(H5Pget_filter_vers)
-   #define H5Pget_filter_vers 1
- #endif /* !defined(H5Pget_filter_vers) */
-@@ -133,6 +169,10 @@
-   #define H5Tarray_create_vers 1
- #endif /* !defined(H5Tarray_create_vers) */
- 
-+#if !defined(H5Sencode_vers)
-+  #define H5Sencode_vers 1
-+#endif /* !defined(H5Sencode_vers) */
-+
- #if !defined(H5Tcommit_vers)
-   #define H5Tcommit_vers 1
- #endif /* !defined(H5Tcommit_vers) */
-@@ -153,6 +193,14 @@
-   #define H5E_auto_t_vers 1
- #endif /* !defined(H5E_auto_t_vers) */
- 
-+#if !defined(H5O_info_t_vers)
-+  #define H5O_info_t_vers 1
-+#endif /* !defined(H5O_info_t_vers) */
-+
-+#if !defined(H5O_iterate_t_vers)
-+  #define H5O_iterate_t_vers 1
-+#endif /* !defined(H5O_iterate_t_vers) */
-+
- #if !defined(H5Z_class_t_vers)
-   #define H5Z_class_t_vers 1
- #endif /* !defined(H5Z_class_t_vers) */
-@@ -261,6 +309,10 @@
-   #define H5Ovisit_by_name_vers 1
- #endif /* !defined(H5Ovisit_by_name_vers) */
- 
-+#if !defined(H5Pencode_vers)
-+  #define H5Pencode_vers 1
-+#endif /* !defined(H5Pencode_vers) */
-+
- #if !defined(H5Pget_filter_vers)
-   #define H5Pget_filter_vers 2
- #endif /* !defined(H5Pget_filter_vers) */